Basic Information
Locus ID:
evm.TU.LG02.1290
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG02 | 21729474 | 21734874 | - | evm.TU.LG02.1290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 48,887.03 Da | 40.90 | 119.95 | 0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 27 | 423 | 2.91263E-53 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 61 | 383 | 4.7E-25 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 61 | 424 | 4.84E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 22 | 424 | 3.7E-36 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 21 | 428 | 9.718579 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 79 | 95 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_044462222.1 | hippocampus abundant transcript-like protein 1 [Mangifera indica] | 0 |
| TrEMBL | A0A5C7GX71 | MFS domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025213 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology