Basic Information
Locus ID:
evm.TU.LG02.1065
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12112944 | 12116283 | + | evm.TU.LG02.1065 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 97,746.07 Da | 35.39 | 110.39 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 74 | 2.0E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 773 | 853 | 2.4E-9 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 177 | 236 | 2.3E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 424 | 483 | 3.4E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 129 | 148 | 0.074 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 377 | 630 | 1.22E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 906 | 2.18E-36 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 337 | 2.38E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 773 | 2.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 317 | 648 | 2.1E-92 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 913 | 1.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 316 | 2.9E-75 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 248 | 271 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 494 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 422 | 446 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 591 | 616 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 150 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 223 | 247 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 175 | 198 | 80.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 914 | 10.930542 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 742 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 470 | 483 | 2.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 130 | 143 | 2.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47570.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017614175.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Gossypium arboreum] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8NM11 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Gossypium hirsutum OX=3635 GN=LOC107948921 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_13573 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1065, evm.TU.LG09.907 |