Basic Information
Locus ID:
evm.TU.LG01.870
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 16319036 | 16336576 | - | evm.TU.LG01.870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 105,062.32 Da | 44.32 | 83.23 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 161 | 222 | 0.00726662 | - |
| CDD | cd02674 | Peptidase_C19R | 754 | 912 | 1.85863E-57 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 313 | 911 | 1.2E-86 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 35 | 139 | 8.3E-25 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 11 | 139 | 5.62E-28 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 311 | 913 | 3.53E-107 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 5 | 151 | 3.8E-37 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 152 | 236 | 3.7E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 589 | 921 | 5.0E-57 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 299 | 537 | 9.3E-67 | - |
| SMART | SM00695 | dusp | 31 | 141 | 2.0E-30 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 313 | 914 | 56.697533 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 12 | 138 | 18.575031 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 314 | 329 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 856 | 873 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 302 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_010684133.1 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1L5JKB1 | Ubiquitin carboxyl-terminal hydrolase OS=Sesuvium portulacastrum OX=221166 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology