Basic Information
Locus ID:
evm.TU.LG01.805
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Sister chromatid cohesion protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 9978682 | 9986343 | - | evm.TU.LG01.805 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 114,507.23 Da | 43.25 | 65.27 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 581 | 625 | 0.00949107 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 59 | 242 | 1.5E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 572 | 627 | 4.6E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 996 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 892 | 929 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 808 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1039 | 1058 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 996 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 757 | - | - |
| Coils | Coil | Coil | 41 | 61 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_031274074.1 | uncharacterized protein LOC116132549 isoform X2 [Pistacia vera] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | V4SUM6 | Tudor domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10024823mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology