Basic Information
Locus ID:
evm.TU.LG01.727
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 8816445 | 8818625 | - | evm.TU.LG01.727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 51,572.95 Da | 46.63 | 97.00 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 47 | 3.1E-4 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 131 | 309 | 2.96E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 53 | 1.96E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 100 | 1.6E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 111 | 337 | 2.4E-8 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 10 | 62 | 9.735919 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_031258469.1 | F-box/FBD/LRR-repeat protein At5g56420-like isoform X1 [Pistacia vera] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2H5QTE6 | F-box domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_259840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology