Basic Information
Locus ID:
evm.TU.LG01.661
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9186538 | 9187041 | - | evm.TU.LG01.661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.38 | 18,498.41 Da | 34.09 | 81.98 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 96 | 158 | 6.7357E-19 | IPR002048 |
| CDD | cd00051 | EFh | 20 | 82 | 1.52815E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 20 | 81 | 1.3E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 94 | 157 | 5.3E-17 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 10 | 158 | 5.18E-46 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 87 | 163 | 1.6E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 1 | 85 | 1.5E-24 | - |
| SMART | SM00054 | efh_1 | 96 | 124 | 1.7E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 132 | 160 | 1.5E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 20 | 48 | 1.9E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 56 | 84 | 0.0016 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 52 | 87 | 12.002819 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 92 | 127 | 15.657116 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 128 | 163 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 16 | 51 | 15.294476 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 105 | 117 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 141 | 153 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 29 | 41 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 65 | 77 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03000.1 | EF hand calcium-binding protein family. Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner | 0 |
| RefSeq | XP_012843118.1 | PREDICTED: probable calcium-binding protein CML18 [Erythranthe guttata] | 0 |
| Q9M8U1 | Probable calcium-binding protein CML18 OS=Arabidopsis thaliana OX=3702 GN=CML18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZVC6 | 2-alkenal reductase (NAD(P)(+)) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology