Basic Information
Locus ID:
evm.TU.LG01.643
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8810706 | 8819819 | - | evm.TU.LG01.643 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 98,506.13 Da | 51.59 | 73.58 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 416 | 471 | 5.09209E-27 | - |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 484 | 841 | 2.7E-38 | IPR001525 |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 417 | 471 | 4.1E-8 | IPR023780 |
| Pfam | PF01426 | BAH domain | 147 | 257 | 8.0E-13 | IPR001025 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 299 | 841 | 3.11E-81 | IPR029063 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 412 | 471 | 3.12E-11 | IPR016197 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 412 | 858 | 4.5E-209 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 635 | 807 | 4.5E-209 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 77 | 245 | 5.2E-48 | IPR043151 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 284 | 380 | 1.1E-13 | - |
| SMART | SM00439 | BAH_4 | 143 | 260 | 6.4E-22 | IPR001025 |
| SMART | SM00298 | chromo_7 | 416 | 475 | 9.4E-8 | IPR000953 |
| TIGRFAM | TIGR00675 | dcm: DNA (cytosine-5-)-methyltransferase | 485 | 838 | 1.3E-31 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 143 | 260 | 18.780439 | IPR001025 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 417 | 470 | 12.086901 | IPR000953 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 297 | 848 | 47.326942 | IPR001525 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 487 | 499 | - | IPR018117 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 298 | 314 | 1.5E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 530 | 544 | 1.5E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 576 | 589 | 1.5E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 410 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 82 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 0 |
| RefSeq | XP_010671153.2 | DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q94F87 | DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana OX=3702 GN=CMT2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A7C9DN37 | Cytosine-specific methyltransferase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology