Basic Information
Locus ID:
evm.TU.LG01.521
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 6189615 | 6200639 | - | evm.TU.LG01.521 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 122,268.87 Da | 39.83 | 94.30 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01433 | Ribosomal_L16_L10e | 967 | 1049 | 6.04953E-29 | IPR016180 |
| CDD | cd14066 | STKc_IRAK | 635 | 901 | 7.4326E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 632 | 898 | 5.6E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 8.8E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 274 | 333 | 1.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 154 | 214 | 1.1E-6 | IPR001611 |
| Pfam | PF00252 | Ribosomal protein L16p/L10e | 967 | 1049 | 2.4E-18 | IPR016180 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 427 | 2.04E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 614 | 937 | 4.45E-78 | IPR011009 |
| SUPERFAMILY | SSF54686 | Ribosomal protein L16p/L10e | 965 | 1059 | 1.1E-39 | IPR036920 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 414 | 2.4E-11 | IPR032675 |
| Gene3D | G3DSA:3.90.1170.10 | Ribosomal protein L10e/L16 | 958 | 1061 | 3.4E-56 | IPR036920 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 292 | 2.1E-65 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 598 | 704 | 2.3E-36 | - |
| Gene3D | G3DSA:3.30.60.300 | - | 1062 | 1097 | 9.2E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 705 | 918 | 2.4E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 225 | 249 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 153 | 176 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 320 | 344 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 297 | 36.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 629 | 903 | 4.1E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 629 | 903 | 38.845192 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 635 | 657 | - | IPR017441 |
| ProSitePatterns | PS01257 | Ribosomal protein L10e signature. | 991 | 1012 | - | IPR018255 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 749 | 761 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 934 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_024039777.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Citrus clementina] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A4LXT3 | Protein kinase domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_07193 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology