Basic Information
Locus ID:
evm.TU.LG01.473
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 5444396 | 5454930 | + | evm.TU.LG01.473 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 132,618.72 Da | 53.35 | 73.62 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 914 | 1171 | 6.23283E-111 | - |
| CDD | cd06410 | PB1_UP2 | 188 | 282 | 9.16834E-49 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 910 | 1171 | 4.7E-65 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 201 | 282 | 1.0E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 898 | 1170 | 5.6E-79 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 200 | 290 | 3.36E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 203 | 284 | 2.5E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 996 | 1187 | 4.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 901 | 995 | 1.7E-25 | - |
| SMART | SM00220 | serkin_6 | 908 | 1175 | 2.3E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 199 | 284 | 3.4E-29 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 908 | 1175 | 41.403446 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 914 | 939 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1033 | 1045 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1027 | 1045 | 3.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1098 | 1120 | 3.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1142 | 1164 | 3.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 990 | 1003 | 3.9E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_021767464.1 | uncharacterized protein LOC110731868 [Chenopodium quinoa] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MLL6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology