Basic Information
Locus ID:
evm.TU.LG01.342
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 3492052 | 3499544 | + | evm.TU.LG01.342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 34,943.21 Da | 53.87 | 63.18 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 188 | 240 | 6.76327E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 182 | 246 | 1.85E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 140 | 245 | 1.1E-6 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 188 | 241 | 10.261575 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 166 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.342, evm.TU.LG04.409 |