Basic Information
Locus ID:
evm.TU.LG01.2813
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 53760066 | 53766360 | - | evm.TU.LG01.2813 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 94,038.87 Da | 48.00 | 83.69 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 529 | 694 | 8.29938E-25 | - |
| Pfam | PF17862 | AAA+ lid domain | 715 | 758 | 4.5E-13 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 563 | 693 | 3.6E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 523 | 765 | 1.1E-58 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 695 | 770 | 8.4E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 522 | 694 | 8.4E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 559 | 696 | 9.8E-21 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 666 | 685 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 486 | - | - |
| Coils | Coil | Coil | 762 | 782 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_022736472.1 | uncharacterized protein LOC111289584 isoform X2 [Durio zibethinus] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A5C7IP49 | AAA domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005976 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology