Basic Information
Locus ID:
evm.TU.LG01.2784
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 64695976 | 64698372 | + | evm.TU.LG01.2784 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 88,161.87 Da | 39.75 | 65.26 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 176 | 259 | 1.88767E-27 | - |
| Pfam | PF00855 | PWWP domain | 173 | 259 | 4.9E-20 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 167 | 268 | 9.03E-28 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 163 | 268 | 1.4E-26 | - |
| SMART | SM00293 | PWWP_4 | 173 | 234 | 6.1E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 175 | 236 | 14.211002 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 486 | - | - |
| Coils | Coil | Coil | 764 | 791 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_021852859.1 | uncharacterized protein LOC110792365 [Spinacia oleracea] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CKA6 | PWWP domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology