halophFGD

Basic Information

Locus ID: evm.TU.LG01.2683

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: heparanase-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	63174290	63180805	+	evm.TU.LG01.2683

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.49	67,175.28 Da	38.26	91.35	-0.14

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03662	Glycosyl hydrolase family 79, N-terminal domain	1	166	3.3E-61	IPR005199
SUPERFAMILY	SSF51445	(Trans)glycosidases	3	210	1.47E-24	IPR017853
Gene3D	G3DSA:3.20.20.80	Glycosidases	1	208	1.3E-32	-
Coils	Coil	Coil	515	535	-	-

Gene Ontology

Molecular Function:

GO:0016798 (hydrolase activity, acting on glycosyl bonds)

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K07964 (heparanase [EC:3.2.1.166])

Pathway:

ko00531 (Glycosaminoglycan degradation) map00531 (Glycosaminoglycan degradation) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Module:

M00078 (Heparan sulfate degradation)

Reaction:

R07811 (Heparan sulfate + H2O <=> Heparan sulfate + G13034)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G61250.1	glucuronidase 1. Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.
RefSeq	XP_021761555.1	heparanase-like protein 1 [Chenopodium quinoa]
Swiss-Prot	Q8L608	Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1
TrEMBL	A0A8S0RG08	Heparanase 2 OS=Olea europaea subsp. europaea OX=158383 GN=OLEA9_A071617 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	14	gene_13821, gene_13822, gene_13823, gene_13824, gene_13825 ... gene_13826, gene_15896, gene_19671, gene_19672, gene_19674, gene_19675, gene_19676, gene_19923, gene_19924
Amaranthaceae	Beta vulgaris	1	BVRB_5g113950
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg31036, Sbi_jg58246
Amaranthaceae	Salicornia europaea	1	Seu_jg25853
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00004674
Apiaceae	Apium graveolens	1	Ag7G00585
Asteraceae	Flaveria trinervia	1	Ftri10G00345
Portulacaceae	Portulaca oleracea	8	evm.TU.LG01.2683, evm.TU.LG01.2686, evm.TU.LG03.2322 ... evm.TU.LG03.2323, evm.TU.LG14.1819, evm.TU.LG14.1820, evm.TU.LG14.1822, evm.TU.LG17.1371
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_11_RagTag.841
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-14516, nbisL1-mrna-25177, nbisL1-mrna-25181 ... nbisL1-mrna-25184
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-20286
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-12437, nbisL1-mrna-5011
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000010l.2
Rhizophoraceae	Kandelia obovata	1	Maker00008688
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-860
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-8500
Solanaceae	Lycium barbarum	1	gene-LOC132623196
Solanaceae	Solanum chilense	1	SOLCI005645400
Solanaceae	Solanum pennellii	1	gene-LOC107009092
Tamaricaceae	Reaumuria soongarica	1	STRG.19339_chr07_+
Tamaricaceae	Tamarix chinensis	1	TC08G2341