Basic Information
Locus ID:
evm.TU.LG01.2662
Species & Taxonomic ID:
Nitraria sibirica & 357931
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 52150800 | 52160008 | + | evm.TU.LG01.2662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 102,956.39 Da | 48.87 | 85.42 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 750 | 906 | 6.16188E-59 | - |
| Pfam | PF06337 | DUSP domain | 38 | 142 | 2.2E-24 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 321 | 905 | 6.3E-87 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 16 | 142 | 8.63E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 319 | 908 | 6.28E-109 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 310 | 544 | 7.8E-68 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 155 | 243 | 1.2E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 666 | 916 | 4.5E-57 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 9 | 154 | 5.7E-36 | - |
| SMART | SM00695 | dusp | 34 | 144 | 1.8E-30 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 321 | 908 | 57.72752 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 15 | 141 | 18.436014 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 850 | 867 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 322 | 337 | - | IPR018200 |
| Coils | Coil | Coil | 917 | 919 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_031285059.1 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Pistacia vera] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1Q3CWU5 | Ubiquitin carboxyl-terminal hydrolase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28146 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology