Basic Information
Locus ID:
evm.TU.LG01.266
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 3258821 | 3259999 | - | evm.TU.LG01.266 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 36,366.31 Da | 23.12 | 99.59 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 55 | 4.9E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 123 | 260 | 5.57E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 96 | 2.35E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 84 | 292 | 2.4E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 53 | 1.4E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 14 | 48 | 8.676143 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58930.2 | - | 0 |
| RefSeq | XP_024033708.1 | F-box/LRR-repeat protein At3g26922-like [Citrus clementina] | 0 |
| Q8GXW6 | F-box/LRR-repeat protein At3g58930 OS=Arabidopsis thaliana OX=3702 GN=At3g58930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HFX2 | F-box domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_020894 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30025950 |
| Nitrariaceae | Nitraria sibirica | 10 | evm.TU.LG01.220, evm.TU.LG01.266, evm.TU.LG03.1934 ... |