Basic Information
Locus ID:
evm.TU.LG01.2520
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 49775558 | 49780262 | - | evm.TU.LG01.2520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 43,068.36 Da | 34.96 | 100.95 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 62 | 325 | 1.2E-90 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 88 | 324 | 5.07E-43 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 89 | 387 | 3.6E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 112 | 238 | 0.0056 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 58 | 377 | 4.6E-102 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 90 | 249 | 31.841125 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 256 | 330 | 21.659685 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 271 | 279 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 148 | 177 | 1.3E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 268 | 296 | 1.3E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 301 | 330 | 1.3E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 182 | 211 | 1.3E-59 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 220 | 249 | 1.3E-59 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_031272307.1 | DNA repair protein recA homolog 2, mitochondrial isoform X1 [Pistacia vera] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IM46 | DNA repair protein recA homolog 2, mitochondrial OS=Acer yangbiense OX=1000413 GN=EZV62_005328 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology