halophFGD

Basic Information

Locus ID: evm.TU.LG01.2514

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: A Receptor for Ubiquitination Targets

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	61721796	61723043	+	evm.TU.LG01.2514

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.32	47,362.11 Da	50.51	91.59	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	17	53	1.9E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	16	61	4.45E-10	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	16	53	1.1E-5	-
SMART	SM00256	fbox_2	17	57	1.6E-5	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021848439.1	F-box/kelch-repeat protein At3g23880-like [Spinacia oleracea]	0
TrEMBL	A0A803MXI8	F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Portulacaceae	Portulaca oleracea	4	evm.TU.LG01.2511, evm.TU.LG01.2514, evm.TU.LG14.1655 ... evm.TU.LG14.1657