Basic Information
Locus ID:
evm.TU.LG01.246
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 3035468 | 3041384 | - | evm.TU.LG01.246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 78,683.26 Da | 42.57 | 85.91 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 424 | 693 | 6.41297E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 123 | 183 | 3.6E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 8.4E-7 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 100 | 114 | 0.54 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 690 | 3.1E-41 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 237 | 8.26E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 690 | 9.83E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 717 | 3.9E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 253 | 5.4E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 495 | 8.1E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 418 | 693 | 35.509567 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 424 | 447 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 287 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_015901360.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Ziziphus jujuba var. spinosa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4ARL6 | protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Ziziphus jujuba OX=326968 GN=LOC107434403 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology