Basic Information
Locus ID:
evm.TU.LG01.2449
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box kelch-repeat protein At3g23880-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 61100902 | 61102133 | - | evm.TU.LG01.2449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 41,324.26 Da | 35.91 | 77.34 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 52 | 2.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 61 | 2.35E-8 | IPR036047 |
| SMART | SM00256 | fbox_2 | 15 | 55 | 1.3E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 113 | 347 | 5.5E-15 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06240.1 | F-box family protein. | 0 |
| RefSeq | XP_006362185.1 | PREDICTED: F-box/kelch-repeat protein At3g23880-like isoform X1 [Solanum tuberosum] | 0 |
| Q8GXC7 | F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 | 0 | |
| TrEMBL | M1A696 | F-Box protein OS=Solanum tuberosum OX=4113 GN=102590482 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19492 |
| Brassicaceae | Brassica nigra | 1 | BniB04g002080.2N |
| Portulacaceae | Portulaca oleracea | 10 | evm.TU.LG01.2444, evm.TU.LG01.2445, evm.TU.LG01.2446 ... |