Basic Information
Locus ID:
evm.TU.LG01.2442
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 48455731 | 48458906 | - | evm.TU.LG01.2442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 96,595.12 Da | 42.95 | 99.98 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 602 | 863 | 8.7E-38 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 460 | 481 | 0.29 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 2.2E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 5.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 219 | 279 | 1.5E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 304 | 8.28E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 606 | 871 | 7.34E-61 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 205 | 527 | 5.78E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 587 | 672 | 1.5E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 673 | 879 | 8.0E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 187 | 1.0E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 268 | 6.7E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 530 | 1.1E-63 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 8.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 217 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 457 | 480 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 96.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 868 | 32.244614 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 865 | 884 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06940.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_031280302.1 | probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Pistacia vera] | 0 |
| Q9FL51 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana OX=3702 GN=At5g06940 PE=3 SV=1 | 0 | |
| TrEMBL | V4SCN9 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10004276mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg15939, jg4372 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19072 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah021687 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g060970 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59254, Sbi_jg63379 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23513 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018421 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl23762 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013500, gene:ENSEOMG00000029572 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3BG0021250 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30187100 |
| Apiaceae | Apium graveolens | 1 | AgUnG01348 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G012070 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717743 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.1243.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G33055 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G06940.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012646m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g35930.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g053900.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1109 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1278 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g08490 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2442 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006615 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4085, BH09.1445, CH09.1555 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0313910, gene-QOZ80_4BG0345070 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0174810.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_044667 |
| Poaceae | Oryza coarctata | 2 | Oco07G008350, Oco08G008250 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g39650.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G131200 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302333, Pt_Chr0302386 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G010820, Chr25G008940, Chr26G008900 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G582400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG048640, gene_TRIDC2BG051300 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G330000.1, TraesCS2B02G352300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb424770_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-7420 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21450 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.524, evm.TU.LG15.421 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1142 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3779 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16334 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18858 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.547 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005536 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12451 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5592 |
| Salicaceae | Populus euphratica | 2 | populus_peu11002, populus_peu26138 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132634023 |
| Solanaceae | Solanum chilense | 1 | SOLCI006941300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012870 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.6957_chr04_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G2411 |