Basic Information
Locus ID:
evm.TU.LG01.240
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 2986795 | 2987679 | - | evm.TU.LG01.240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 32,182.97 Da | 59.94 | 80.85 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 102 | 145 | 7.10167E-20 | - |
| Pfam | PF13639 | Ring finger domain | 102 | 145 | 3.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 83 | 149 | 5.42E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 154 | 2.2E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 103 | 144 | 1.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 103 | 145 | 12.341748 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 294 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53820.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_031252514.1 | RING-H2 finger protein ATL3-like [Pistacia vera] | 0 |
| P0C035 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I4HQ44 | RING-type E3 ubiquitin transferase OS=Juglans regia OX=51240 GN=LOC109020298 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology