HalophFGD

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Basic Information
Locus ID: evm.TU.LG01.2376
Species & Taxonomic ID: Nitraria sibirica & 357931
Genome Assembly:
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
LG01 47485491 47488340 - evm.TU.LG01.2376
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.68 25,411.04 Da 41.60 84.95 -0.28
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 7 46 8.6E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 7 68 9.16E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 7 45 1.6E-6 -
SMART SM00256 fbox_2 11 51 0.0016 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_024039561.1 F-box protein At4g00893-like [Citrus clementina] 0
TrEMBL A0A5C7IAU8 F-box domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007486 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Nitrariaceae Nitraria sibirica 48 evm.TU.LG01.1349, evm.TU.LG01.1381, evm.TU.LG01.1618 ...
evm.TU.LG01.1728, evm.TU.LG01.1729, evm.TU.LG01.1800, evm.TU.LG01.2117, evm.TU.LG01.2287, evm.TU.LG01.2376, evm.TU.LG01.2410, evm.TU.LG01.896, evm.TU.LG02.1261, evm.TU.LG02.1521, evm.TU.LG02.810, evm.TU.LG03.1239, evm.TU.LG03.1283, evm.TU.LG03.1538, evm.TU.LG03.855, evm.TU.LG04.1103, evm.TU.LG04.1418, evm.TU.LG04.1549, evm.TU.LG04.1639, evm.TU.LG04.1699, evm.TU.LG05.1024, evm.TU.LG05.1117, evm.TU.LG05.1216, evm.TU.LG05.1720, evm.TU.LG05.243, evm.TU.LG05.839, evm.TU.LG05.840, evm.TU.LG06.1711, evm.TU.LG06.42, evm.TU.LG07.176, evm.TU.LG07.255, evm.TU.LG08.1253, evm.TU.LG08.1403, evm.TU.LG08.566, evm.TU.LG08.67, evm.TU.LG08.877, evm.TU.LG09.351, evm.TU.LG09.377, evm.TU.LG09.572, evm.TU.LG09.590, evm.TU.LG10.170, evm.TU.LG11.1436, evm.TU.LG11.826, evm.TU.LG12.132, evm.TU.LG12.140
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.