Basic Information
Locus ID:
evm.TU.LG01.2363
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 47249026 | 47253665 | + | evm.TU.LG01.2363 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 114,482.78 Da | 32.82 | 95.69 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 278 | 337 | 2.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 517 | 574 | 3.2E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 722 | 992 | 6.8E-48 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 89 | 434 | 9.42E-71 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 378 | 627 | 2.07E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 723 | 995 | 8.63E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 641 | 1.1E-88 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 799 | 1005 | 1.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 693 | 798 | 6.6E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 323 | 1.9E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 197 | 2.3E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 720 | 999 | 4.4E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 563 | 586 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 300 | 324 | 6.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 469 | 492 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 204 | 228 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 276 | 299 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 132 | 156 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 444 | 468 | 58.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 720 | 1002 | 38.562511 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 726 | 749 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 846 | 858 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006421630.1 | leucine-rich repeat receptor-like protein kinase TDR, partial [Citrus clementina] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | V4S7R3 | Protein kinase domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10004254mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology