Basic Information
Locus ID:
evm.TU.LG01.1969
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 54606540 | 54614079 | + | evm.TU.LG01.1969 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 55,351.08 Da | 51.66 | 78.67 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 340 | 453 | 1.8E-9 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 116 | 214 | 1.4E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 4 | 103 | 3.5E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 483 | 2.32E-29 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 1 | 105 | 2.0E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 346 | 465 | 7.1E-10 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 112 | 216 | 6.1E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 345 | 2.6E-17 | - |
| SMART | SM00219 | tyrkin_6 | 307 | 453 | 5.0E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 470 | 9.389936 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 111 | 216 | 17.828562 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 105 | 16.425486 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 313 | 335 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_052730283.1 | cysteine-rich receptor-like protein kinase 44 [Vigna angularis] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7C9EDW4 | Cysteine-rich receptor-like protein kinase 25 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1968, evm.TU.LG01.1969, evm.TU.LG14.1144 ... |