Basic Information
Locus ID:
evm.TU.LG01.1968
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 54589105 | 54592257 | + | evm.TU.LG01.1968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 52,413.76 Da | 60.58 | 81.30 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 38 | 138 | 5.7E-15 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 151 | 247 | 4.1E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 459 | 1.69E-5 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 349 | 432 | 5.5E-9 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 34 | 139 | 1.9E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 147 | 250 | 1.1E-20 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 32 | 140 | 16.081507 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 250 | 17.629416 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.2 | - | 0 |
| RefSeq | XP_022845316.1 | cysteine-rich receptor-like protein kinase 29 [Olea europaea var. sylvestris] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7C9EDW4 | Cysteine-rich receptor-like protein kinase 25 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1968, evm.TU.LG01.1969, evm.TU.LG14.1144 ... |