Basic Information
Locus ID:
evm.TU.LG01.1894
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 53226491 | 53229761 | + | evm.TU.LG01.1894 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 57,119.34 Da | 30.79 | 87.03 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 380 | 451 | 2.1E-21 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 43 | 362 | 7.0E-73 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 43 | 362 | 3.55E-79 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 42 | 369 | 2.3E-109 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 373 | 495 | 4.8E-12 | - |
| SMART | SM00768 | X8_cls | 379 | 464 | 2.1E-52 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 277 | 290 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021853052.1 | glucan endo-1,3-beta-glucosidase 1 [Spinacia oleracea] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9QUE2 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_140130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology