Basic Information
Locus ID:
evm.TU.LG01.1875
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 37251708 | 37255182 | - | evm.TU.LG01.1875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 54,634.38 Da | 56.74 | 51.96 | -1.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 267 | 350 | 2.7E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 123 | - | - |
| Coils | Coil | Coil | 282 | 312 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_006430024.1 | protein WVD2-like 4 isoform X1 [Citrus clementina] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | V4UUE1 | TPX2 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10012108mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology