Basic Information
Locus ID:
evm.TU.LG01.1834
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 35428434 | 35429559 | - | evm.TU.LG01.1834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 38,880.45 Da | 47.22 | 71.70 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 114 | 157 | 1.7E-9 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 160 | 204 | 2.3E-10 | IPR006652 |
| Pfam | PF12937 | F-box-like | 8 | 51 | 2.1E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 51 | 2.49E-9 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 86 | 276 | 3.79E-38 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 47 | 4.2E-6 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 59 | 285 | 1.3E-39 | IPR015915 |
| SMART | SM00256 | fbox_2 | 11 | 51 | 6.6E-5 | IPR001810 |
| SMART | SM00612 | kelc_smart | 122 | 170 | 2.9E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 171 | 218 | 2.3E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006429949.1 | F-box/kelch-repeat protein At2g44130 [Citrus clementina] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A067G5F0 | F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g018336mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology