Basic Information
Locus ID:
evm.TU.LG01.1734
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase At1g11330 isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 49484183 | 49501077 | + | evm.TU.LG01.1734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 86,688.83 Da | 29.01 | 83.88 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 25 | 130 | 2.53739E-27 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 200 | 282 | 5.09552E-22 | - |
| CDD | cd00028 | B_lectin | 399 | 533 | 2.23614E-21 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 585 | 669 | 1.88461E-18 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 117 | 181 | 7.7E-14 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 447 | 540 | 4.7E-16 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 484 | 567 | 1.4E-17 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 593 | 654 | 2.6E-13 | IPR003609 |
| Pfam | PF08276 | PAN-like domain | 207 | 267 | 1.2E-13 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 68 | 144 | 5.8E-21 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 446 | 533 | 1.57E-13 | IPR036426 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 69 | 134 | 7.85E-18 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 395 | 6.29E-12 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 724 | 772 | 1.2E-5 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 395 | 535 | 1.2E-15 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 13 | 143 | 5.3E-18 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 313 | 394 | 3.9E-18 | - |
| SMART | SM00473 | ntp_6 | 594 | 668 | 9.1E-9 | IPR003609 |
| SMART | SM00108 | blect_4 | 25 | 143 | 4.9E-23 | IPR001480 |
| SMART | SM00108 | blect_4 | 397 | 537 | 3.1E-16 | IPR001480 |
| SMART | SM00473 | ntp_6 | 208 | 281 | 2.1E-8 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 397 | 522 | 16.379223 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 19 | 143 | 18.067173 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 203 | 282 | 9.01434 | IPR003609 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 589 | 669 | 9.34774 | IPR003609 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11300.1 | protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding. | 0 |
| RefSeq | XP_021719431.1 | uncharacterized protein LOC110687121 [Chenopodium quinoa] | 0 |
| Q9SXB4 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2N9HL38 | G-type lectin S-receptor-like serine/threonine-protein kinase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40834 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG01.1731, evm.TU.LG01.1732, evm.TU.LG01.1733 ... |