Basic Information
Locus ID:
evm.TU.LG01.1732
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 49398411 | 49410491 | + | evm.TU.LG01.1732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 76,524.75 Da | 49.87 | 70.87 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 179 | 267 | 1.96186E-19 | - |
| Pfam | PF08276 | PAN-like domain | 191 | 252 | 2.4E-14 | IPR003609 |
| Pfam | PF14303 | No apical meristem-associated C-terminal domain | 561 | 665 | 6.9E-13 | IPR029466 |
| Pfam | PF00954 | S-locus glycoprotein domain | 54 | 161 | 7.2E-22 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 356 | 393 | 1.81E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 397 | 1.0E-6 | - |
| SMART | SM00473 | ntp_6 | 192 | 266 | 3.7E-10 | IPR003609 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 183 | 267 | 8.650633 | IPR003609 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_010667681.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9D5H4 | Non-specific serine/threonine protein kinase (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG01.1731, evm.TU.LG01.1732, evm.TU.LG01.1733 ... |