Basic Information
Locus ID:
evm.TU.LG01.154
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 1324321 | 1326414 | - | evm.TU.LG01.154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 61,919.16 Da | 36.54 | 77.11 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 203 | 241 | 1.0723E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 473 | 1.3E-9 | IPR001245 |
| Pfam | PF01476 | LysM domain | 205 | 248 | 9.2E-6 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 203 | 249 | 6.28E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 470 | 1.4E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 452 | 2.6E-13 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 190 | 262 | 4.1E-8 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 550 | 8.7E-6 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 564 | 8.994184 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 203 | 247 | 10.442641 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021856141.1 | protein LYK5 isoform X1 [Spinacia oleracea] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9ALC6 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology