Basic Information
Locus ID:
evm.TU.LG01.1470
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 19368609 | 19372496 | + | evm.TU.LG01.1470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 142,926.89 Da | 35.72 | 102.18 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 850 | 909 | 2.0E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 546 | 605 | 3.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 62 | 9.2E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 1018 | 1288 | 8.6E-30 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 114 | 136 | 0.94 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 94 | 494 | 1.73E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 381 | 637 | 1.09E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 645 | 912 | 3.4E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 994 | 1292 | 6.7E-58 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 638 | 942 | 1.9E-77 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 470 | 637 | 8.3E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 210 | 2.2E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 978 | 1092 | 6.5E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 469 | 1.7E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 137 | 8.6E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1093 | 1293 | 5.0E-45 | - |
| SMART | SM00369 | LRR_typ_2 | 184 | 208 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 304 | 327 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 568 | 592 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 88 | 111 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 848 | 871 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 616 | 640 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 328 | 352 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 425 | 449 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 256 | 279 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1017 | 1293 | 28.442568 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1023 | 1046 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07280.1 | Leucine-rich repeat transmembrane protein kinase. Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. | 0 |
| RefSeq | XP_034693428.1 | leucine-rich repeat receptor protein kinase EMS1-like [Vitis riparia] | 0 |
| Q9LYN8 | Leucine-rich repeat receptor protein kinase EMS1 OS=Arabidopsis thaliana OX=3702 GN=EMS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438H7A2 | Leucine-rich repeat receptor protein kinase EMS1 OS=Vitis vinifera OX=29760 GN=EMS1_10 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for evm.TU.LG01.1470.