Basic Information
Locus ID:
evm.TU.LG01.1465
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 42947684 | 42953184 | - | evm.TU.LG01.1465 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 86,068.22 Da | 36.99 | 89.77 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 499 | 632 | 1.63691E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 653 | 691 | 4.6E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 501 | 631 | 4.5E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 460 | 689 | 2.57E-58 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 62 | 302 | 2.9E-7 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 634 | 744 | 1.9E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 461 | 747 | 1.9E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 497 | 634 | 3.8E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 604 | 623 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 433 | - | - |
| Coils | Coil | Coil | 684 | 706 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_021839848.1 | putative cell division cycle ATPase [Spinacia oleracea] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QMI3 | AAA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_167600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology