Basic Information
Locus ID:
evm.TU.LG01.1069
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Mitogen-activated protein kinase-binding protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG01 | 13047943 | 13055267 | - | evm.TU.LG01.1069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 133,242.80 Da | 46.20 | 80.27 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 449 | 473 | 0.1 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 356 | 403 | 0.27 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 155 | 181 | 0.13 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 107 | 139 | 5.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 673 | 703 | 0.23 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 392 | 703 | 1.22E-49 | IPR036322 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 65 | 564 | 5.89E-32 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 26 | 282 | 4.4E-35 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 583 | 725 | 6.3E-19 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 319 | 582 | 2.0E-31 | IPR015943 |
| SMART | SM00320 | WD40_4 | 620 | 661 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 435 | 473 | 0.31 | IPR001680 |
| SMART | SM00320 | WD40_4 | 56 | 99 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 247 | 282 | 330.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 579 | 617 | 29.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 664 | 703 | 1.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 307 | 341 | 58.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 530 | 569 | 5.0E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 142 | 182 | 1.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 476 | 526 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 102 | 139 | 4.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 347 | 403 | 12.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 671 | 704 | 9.472486 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1038 | 1080 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1041 | 1074 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09080.3 | - | 0 |
| RefSeq | XP_031276141.1 | mitogen-activated protein kinase-binding protein 1 [Pistacia vera] | 0 |
| Q3U3T8 | WD repeat-containing protein 62 OS=Mus musculus OX=10090 GN=Wdr62 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5C7HNU5 | Mitogen-activated protein kinase-binding protein 1 OS=Acer yangbiense OX=1000413 GN=EZV62_016586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14799 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30285450 |
| Apiaceae | Apium graveolens | 1 | Ag5G02363 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G25194 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G09080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022253m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07530.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g058390.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1051 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G1076, Cgl08G1077 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1010s00004.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1069 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006461 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09988 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1767 |
| Salicaceae | Populus euphratica | 1 | populus_peu11401 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132630690 |
| Solanaceae | Solanum chilense | 1 | SOLCI000172200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029641 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4371 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G1795 |