Basic Information
Locus ID:
evm.TU.LG01.1049
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 24703101 | 24710943 | + | evm.TU.LG01.1049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 69,025.27 Da | 39.37 | 96.56 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14664 | STK_BAK1_like | 310 | 581 | 2.93791E-163 | - |
| Pfam | PF00069 | Protein kinase domain | 305 | 576 | 1.5E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 2.6E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 283 | 579 | 9.19E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 192 | 3.4E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 380 | 9.4E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 214 | 6.9E-63 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 598 | 3.7E-71 | - |
| SMART | SM00220 | serkin_6 | 304 | 578 | 5.7E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 591 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 427 | 439 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 332 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34210.1 | somatic embryogenesis receptor-like kinase 2. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. | 0 |
| RefSeq | XP_021714851.1 | somatic embryogenesis receptor kinase 2 [Chenopodium quinoa] | 0 |
| Q9XIC7 | Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZX87 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology