Basic Information
Locus ID:
evm.TU.LG01.103
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 847356 | 848140 | + | evm.TU.LG01.103 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 20,007.90 Da | 53.95 | 95.96 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 91 | 134 | 3.79708E-19 | - |
| Pfam | PF13639 | Ring finger domain | 91 | 134 | 9.7E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 86 | 138 | 1.11E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 139 | 9.4E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 92 | 133 | 4.1E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 92 | 134 | 12.754832 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47560.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_018815733.2 | RING-H2 finger protein ATL2-like [Juglans regia] | 0 |
| O22255 | RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9D5A9 | RING-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology