Basic Information
Locus ID:
evm.TU.LG01.10
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 45661 | 50875 | - | evm.TU.LG01.10 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 82,700.54 Da | 38.58 | 92.96 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 40 | 338 | 3.48389E-171 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 47 | 299 | 1.6E-7 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 361 | 651 | 5.1E-25 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 39 | 337 | 1.73E-46 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 355 | 656 | 1.7E-39 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 354 | 656 | 7.0E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 39 | 337 | 8.1E-42 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 40 | 339 | 37.212048 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 356 | 656 | 32.835312 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 732 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66970.1 | SHV3-like 2. | 0 |
| RefSeq | XP_021739586.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Chenopodium quinoa] | 0 |
| Q7Y208 | Glycerophosphodiester phosphodiesterase GDPDL1 OS=Arabidopsis thaliana OX=3702 GN=GDPDL1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9AT96 | glycerophosphodiester phosphodiesterase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology