Basic Information
Locus ID:
evm.TU.Contig8.16
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
phosphate ion transport
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig8 | 40704 | 42476 | + | evm.TU.Contig8.16 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 45,299.33 Da | 42.05 | 83.03 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00439 | Bromodomain | 195 | 275 | 2.5E-21 | IPR001487 |
| Pfam | PF00083 | Sugar (and other) transporter | 310 | 365 | 6.8E-8 | IPR005828 |
| SUPERFAMILY | SSF47370 | Bromodomain | 188 | 289 | 1.44E-30 | IPR036427 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 316 | 387 | 6.93E-7 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 303 | 394 | 1.1E-12 | IPR036259 |
| Gene3D | G3DSA:1.20.920.10 | - | 178 | 302 | 1.3E-30 | IPR036427 |
| SMART | SM00297 | bromo_6 | 182 | 291 | 2.3E-26 | IPR001487 |
| ProSiteProfiles | PS50014 | Bromodomain profile. | 201 | 272 | 18.7778 | IPR001487 |
| ProSitePatterns | PS00633 | Bromodomain signature. | 206 | 264 | - | IPR018359 |
| PRINTS | PR00503 | Bromodomain signature | 204 | 217 | 5.1E-15 | IPR001487 |
| PRINTS | PR00503 | Bromodomain signature | 234 | 252 | 5.1E-15 | IPR001487 |
| PRINTS | PR00503 | Bromodomain signature | 253 | 272 | 5.1E-15 | IPR001487 |
| PRINTS | PR00503 | Bromodomain signature | 218 | 234 | 5.1E-15 | IPR001487 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 163 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54610.1 | histone acetyltransferase of the GNAT family 1. Encodes a histone acetyltransferase that is plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14. | 0 |
| RefSeq | XP_002464623.2 | histone acetyltransferase GCN5 [Sorghum bicolor] | 0 |
| Q338B9 | Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica OX=39947 GN=GCN5 PE=1 SV=1 | 0 | |
| TrEMBL | F0WTI0 | Uncharacterized protein AlNc14C252G9660 OS=Albugo laibachii Nc14 OX=890382 GN=AlNc14C252G9660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20691 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22407 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah016705 |
| Amaranthaceae | Salicornia bigelovii | 9 | Sbi_jg15754, Sbi_jg40281, Sbi_jg40296, Sbi_jg50275 ... |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg13767, Seu_jg1860, Seu_jg1875, Seu_jg1876, Seu_jg1877 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00011457, GOSA_00011458, GOSA_00011459 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl41668 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010899, gene:ENSEOMG00000034929 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0008240, CQ.Regalona.r1.8BG0008840 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30071030 |
| Apiaceae | Apium graveolens | 5 | Ag4G01483, Ag4G01484, Ag5G02180, Ag6G01096, Ag7G00859 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G012290, scaffold000006G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103707184 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.1149.V1.1, AsparagusV1_07.3811.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri15G16699, Ftri18G30349 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G46550.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10000859m.g.v1.0, Thhalv10011031m.g.v1.0 |
| Brassicaceae | Brassica nigra | 3 | BniB03g027770.2N, BniB04g010930.2N, BniB04g058530.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1009 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1139 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g06680 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0086s00023.v1.0, Dusal.0806s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g19500 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.730 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00038410 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb0G37935, Lb1G00204, Lb1G00205, Lb2G13413 |
| Poaceae | Echinochloa crus-galli | 8 | AH03.3106, AH04.450, AH07.111, BH03.3292, BH04.490, BH09.6 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0671130, gene-QOZ80_9BG0694550 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0747990.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_009913, gene-QYE76_068437 |
| Poaceae | Oryza coarctata | 2 | Oco13G008220, Oco14G008690 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g32420.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G288400, gene-BS78_05G083300 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0401502, Pt_Chr0501816, Pt_Chr0501878 |
| Poaceae | Sporobolus alterniflorus | 7 | Chr07G020490, Chr16G010250, Chr17G009340, Chr19G005900 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G940100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG075220 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G539800.2, TraesCS7B02G461100.3 ... |
| Poaceae | Zea mays | 2 | Zm00001eb091620_P002, Zm00001eb200990_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-27162, nbis-gene-51506 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g17634, Zma_g18486 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.Contig8.16, evm.TU.LG10.1109, evm.TU.LG18.221 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g19090 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_14_RagTag.842, evm.TU.Scaffold_16_RagTag.747 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24920 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-4176, nbisL1-mrna-5497 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-17168, nbisL1-mrna-19140 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000025l.58 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00012200, Maker00016195 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-122, nbisL1-mrna-15905 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-10374, nbisL1-mrna-23785 |
| Salicaceae | Populus euphratica | 2 | populus_peu00958, populus_peu17955 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621115 |
| Solanaceae | Solanum chilense | 1 | SOLCI004832400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011758 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.17985_chr09_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1822 |
| Zosteraceae | Zostera marina | 2 | Zosma01g07120.v3.1, Zosma01g34590.v3.1 |