Basic Information
Locus ID:
evm.TU.Contig12.4
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Microtubule associated serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig12 | 11204 | 12903 | + | evm.TU.Contig12.4 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 39,107.95 Da | 44.70 | 92.63 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 178 | 231 | 1.1E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 179 | 340 | 5.64E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 189 | 231 | 6.6E-15 | - |
| SMART | SM00220 | serkin_6 | 105 | 346 | 7.7E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 346 | 10.647862 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_031479675.1 | probable serine/threonine protein kinase IRE4 isoform X4 [Nymphaea colorata] | 0 |
| F4J6F6 | Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana OX=3702 GN=IREH1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K1CM72 | Protein kinase domain-containing protein OS=Pythium oligandrum OX=41045 GN=Poli38472_009069 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag8G00265 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00034685 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.Contig12.4 |