Basic Information
Locus ID:
evm.TU.58473.3
Species & Taxonomic ID:
Bruguiera sexangula & 98584
Genome Assembly:
GCA_020141445.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 58473 | 18060 | 20587 | + | evm.TU.58473.3 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 61,632.00 Da | 45.77 | 102.54 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 40 | 2.9E-10 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 150 | 353 | 2.79E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 61 | 6.41E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 42 | 7.0E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 392 | 1.1E-10 | IPR032675 |
| SMART | SM00256 | fbox_2 | 7 | 47 | 4.3E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 35 | 11.299088 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G44950.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021651842.1 | putative FBD-associated F-box protein At5g56410 [Hevea brasiliensis] | 0 |
| Q84W80 | F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana OX=3702 GN=At3g03360 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P9EYU6 | F-box/LRR-repeat protein At3g03360-like OS=Juglans regia OX=51240 GN=LOC109018596 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology