Basic Information
Locus ID:
evm.TU.51077.2
Species & Taxonomic ID:
Bruguiera sexangula & 98584
Genome Assembly:
GCA_020141445.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 51077 | 2986 | 3422 | + | evm.TU.51077.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 12,559.23 Da | 33.65 | 69.91 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 60 | 107 | 2.3E-9 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 18 | 107 | 2.44E-15 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 14 | 110 | 1.6E-15 | - |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 112 | 11.588319 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 89 | 97 | - | IPR001579 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021662150.1 | acidic mammalian chitinase-like [Hevea brasiliensis] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JMW1 | Uncharacterized protein MANES_14G141000 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology