Basic Information
Locus ID:
evm.TU.43801.1
Species & Taxonomic ID:
Bruguiera sexangula & 98584
Genome Assembly:
GCA_020141445.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 43801 | 8850 | 9263 | - | evm.TU.43801.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.48 | 15,737.99 Da | 47.59 | 78.91 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 110 | 2.0E-10 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 127 | 7.13E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 126 | 2.2E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 116 | 10.393451 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60900.1 | receptor-like protein kinase 1. Encodes a receptor-like protein kinase. | 0 |
| RefSeq | XP_006440230.2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [Citrus clementina] | 0 |
| Q7FAZ2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2MHV7 | Serine/threonine-protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg16274, jg26040, jg37749, jg39631 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg36268 |
| Anacardiaceae | Pistacia vera | 7 | pistato.v30110330, pistato.v30110340, pistato.v30110370 ... |
| Apiaceae | Apium graveolens | 1 | Ag9G01421 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G001370 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g24210.v2.2 |
| Casuarinaceae | Casuarina glauca | 11 | Cgl05G1970, Cgl05G2106, Cgl05G2125, Cgl05G2151, Cgl05G2161 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6208 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.16 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g73370.1 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG013920, gene_TRIDC6AG013940 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-32147 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.43801.1 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-11306, nbisL1-mrna-17625 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000782 |
| Rhizophoraceae | Rhizophora apiculata | 6 | nbisL1-mrna-15058, nbisL1-mrna-19187, nbisL1-mrna-19188 ... |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23869 |