Basic Information
Locus ID:
contig69436837G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| contig69436837 | 967 | 2220 | - | contig69436837G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 10,852.18 Da | 55.88 | 72.08 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 20 | 87 | 1.5E-13 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 15 | 92 | 6.51E-17 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 7 | 92 | 4.5E-24 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 17 | 92 | 11.507508 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_019707332.1 | small ubiquitin-related modifier 1-like isoform X1 [Elaeis guineensis] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6J0PK54 | small ubiquitin-related modifier 1-like isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC109506098 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology