halophFGD

Basic Information

Locus ID: contig69263270G000010

Species & Taxonomic ID: Cocos nucifera & 13894

Genome Assembly: GCA_008124465.1

Short Name: RAPTOR1

Description: Regulatory-associated protein of TOR

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
contig69263270	76	1481	-	contig69263270G000010

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.77	17,678.64 Da	33.85	89.56	-0.11

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF50978	WD40 repeat-like	5	160	2.5E-19	IPR036322
Gene3D	G3DSA:2.130.10.10	-	4	161	9.7E-18	IPR015943
SMART	SM00320	WD40_4	14	58	1.2	IPR001680
SMART	SM00320	WD40_4	114	155	0.79	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K07204 (regulatory associated protein of mTOR)

Pathway:

ko04136 (Autophagy - other) map04136 (Autophagy - other) ko04138 (Autophagy - yeast) map04138 (Autophagy - yeast) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G08850.1	HEAT repeat ;WD domain, G-beta repeat protein protein. Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.	0
RefSeq	XP_010931321.1	regulatory-associated protein of TOR 1 [Elaeis guineensis]	0
Swiss-Prot	Q93YQ1	Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana OX=3702 GN=RAPTOR1 PE=1 SV=1	0
TrEMBL	A0A6I9RRQ5	regulatory-associated protein of TOR 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105052260 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Beta vulgaris	1	BVRB_7g157960
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000004897, gene:ENSEOMG00000008315 ... gene:ENSEOMG00000037663
Apiaceae	Apium graveolens	1	Ag10G01636
Arecaceae	Cocos nucifera	1	contig69263270G000010
Poaceae	Sporobolus alterniflorus	2	Chr16G008240, Chr16G008280
Solanaceae	Solanum pennellii	1	gene-LOC107002516