Basic Information
Locus ID:
contig69218186G000010
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
CCR4-associated factor 1 homolog 7
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| contig69218186 | 57 | 1368 | - | contig69218186G000010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 30,726.66 Da | 32.80 | 95.31 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04857 | CAF1 family ribonuclease | 16 | 140 | 1.0E-10 | IPR006941 |
| Pfam | PF04857 | CAF1 family ribonuclease | 163 | 218 | 8.3E-6 | IPR006941 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 13 | 269 | 1.58E-85 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 2 | 271 | 1.2E-96 | IPR036397 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32070.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_010927524.1 | probable CCR4-associated factor 1 homolog 7 [Elaeis guineensis] | 0 |
| Q9SKZ2 | Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9RJV1 | poly(A)-specific ribonuclease OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105049545 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology