Basic Information
Locus ID:
add.evm.TU.utg000033l.39
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000033l | 990534 | 992174 | - | add.evm.TU.utg000033l.39 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 50,347.97 Da | 37.48 | 117.68 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 400 | 419 | 0.27 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 324 | 339 | 1.1 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 18 | 51 | 2.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 157 | 214 | 5.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 279 | 7.14E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 223 | 462 | 1.55E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 469 | 5.9E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 124 | 226 | 8.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 15 | 123 | 4.8E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 421 | 445 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 102 | 125 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 225 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 287 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 300 | 324 | 5.6 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 267 | 288 | 7.303818 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24130.2 | - | 0 |
| RefSeq | XP_024445758.2 | putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Populus trichocarpa] | 0 |
| Q9ZUI0 | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana OX=3702 GN=At2g24130 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6A6MWM7 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_009789 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0009830, gene-QOZ80_1AG0026220 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g7616 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000033l.39 |