HalophFGD

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Basic Information
Locus ID: add.evm.TU.utg000027l.29
Species & Taxonomic ID: Kandelia candel & 61147
Genome Assembly: GCA_037832225.1
Description: G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
PERG.utg000027l 620896 621592 - add.evm.TU.utg000027l.29
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.66 19,615.15 Da 45.08 77.75 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00954 S-locus glycoprotein domain 1 61 1.1E-12 IPR000858
Pfam PF08276 PAN-like domain 72 130 3.1E-11 IPR003609
Gene Ontology
Biological Process:
GO:0048544 (recognition of pollen)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021599032.1 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X2 [Manihot esculenta] 0
TrEMBL A0A6A6MZT5 non-specific serine/threonine protein kinase OS=Hevea brasiliensis OX=3981 GN=GH714_020756 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_207
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_12_RagTag.946
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-23865, nbisL1-mrna-23867, nbisL1-mrna-23869 ...
nbisL1-mrna-23870
Rhizophoraceae Kandelia candel 2 add.evm.TU.utg000027l.29, add.evm.TU.utg000027l.30
Rhizophoraceae Kandelia obovata 2 Maker00017399, Maker00017467
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-2278
Rhizophoraceae Rhizophora mangle 10 nbisL1-mrna-23221, nbisL1-mrna-23222, nbisL1-mrna-23870 ...
nbisL1-mrna-23871, nbisL1-mrna-23873, nbisL1-mrna-23874, nbisL1-mrna-23875, nbisL1-mrna-23876, nbisL1-mrna-25424, nbisL1-mrna-25446
Salicaceae Populus euphratica 4 populus_peu18316, populus_peu18318, populus_peu18320 ...
populus_peu18322
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.