Basic Information
Locus ID:
add.evm.TU.utg000027l.250
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000027l | 6706880 | 6708743 | - | add.evm.TU.utg000027l.250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 50,111.79 Da | 30.86 | 93.30 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 322 | 406 | 5.4E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 320 | 403 | 1.28E-13 | IPR011009 |
| SUPERFAMILY | SSF49854 | Spermadhesin, CUB domain | 124 | 171 | 9.68E-6 | IPR035914 |
| SUPERFAMILY | SSF49854 | Spermadhesin, CUB domain | 180 | 261 | 1.44E-8 | IPR035914 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 319 | 424 | 1.8E-11 | - |
| Gene3D | G3DSA:2.60.120.290 | Spermadhesin, CUB domain | 103 | 177 | 2.5E-5 | IPR035914 |
| Gene3D | G3DSA:2.60.120.290 | Spermadhesin, CUB domain | 178 | 263 | 1.6E-6 | IPR035914 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 318 | 446 | 10.760935 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021653408.1 | wall-associated receptor kinase-like 18 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A6A6KSB9 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035841 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30051130 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_12_RagTag.63, evm.TU.Scaffold_12_RagTag.64 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24736 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000027l.250 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18901 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11605 |