Basic Information
Locus ID:
add.evm.TU.utg000027l.232
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000027l | 6381082 | 6383424 | - | add.evm.TU.utg000027l.232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 67,479.53 Da | 38.98 | 88.58 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00180 | PKc | 484 | 583 | 5.28949E-9 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 202 | 227 | 2.1E-5 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 160 | 186 | 8.3E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 594 | 5.79E-15 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 28 | 269 | 1.05E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 549 | 1.3E-22 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 63 | 400 | 1.5E-25 | IPR009091 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 477 | 632 | 11.269758 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_034893683.1 | putative serine/threonine-protein kinase-like protein CCR3 [Populus alba] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2ZSC4 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_001620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology