Basic Information
Locus ID:
add.evm.TU.utg000023l.95
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000023l | 2100479 | 2101177 | - | add.evm.TU.utg000023l.95 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 25,903.97 Da | 44.32 | 78.58 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 48 | 222 | 5.7E-41 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 128 | 193 | 7.59E-14 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 45 | 225 | 4.57E-29 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 57 | 223 | 9.0E-57 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 127 | 193 | 9.0E-57 | IPR029070 |
| SMART | SM00636 | 2g34 | 1 | 222 | 6.2E-8 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 232 | 29.664503 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_012074871.1 | class V chitinase [Jatropha curcas] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A067KHH4 | GH18 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_09020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology